I ordered a Pikmin manual a year or two ago. So, it's entirely possible these problems have been fixed / were a fluke. That said...
The manual was printed with fairly decent quality on fairly decent paper. The manual is printed on both sides of the paper. However, it's not in an order that would allow you to get fancy with some scissors to make your own manual. The "front" has both the cover and back of the manual, while the back of the front page has pages 2-3.
Oh yeah, the entire thing also looks like someone took a manual, ran to the copy machine with it, and copied it. The "front" page with the cover and pack shows clear signs of a crease, shelf wear, and even shows the staples. Internal pages also show creases, staple holes, folds, etc.
It's passable if you want it as a reference material, but not really for collective purposes.