Oh man, I have a huge one. I'll try to list everything.
Ar tonelico
Ar tonelico II
Breath of Fire: Dragon Quarter
Dragon Quest VIII
Eternal Poison
Final Fantasy X-2
Grandia III
Growlanser Generations
Growlanser: Heritage of War
.hack/G.U. Vol. 1
.hack/G.U. Vol. 2
.hack/G.U. Vol. 3
Kingdom Hearts
Kingdom Hearts II
Phantasy Star Universe
Phantasy Star Universe: Ambition of the Illuminus
Rogue Galaxy
Sakura Wars
Shadow Hearts
Shadow Hearts: From the New World
Shin Megami Tensei: Devil Summoner 2
Shin Megami Tensei: Digital Devil Saga
Shin Megami Tensei: Digital Devil Saga 2
Shin Megami Tensei: Nocturne
Shin Megami Tensei: Persona 3
Shin Megami Tensei: Persona 3 FES
Shin Megami Tensei: Persona 4
Wild ARMs Alter Code: F
Wild ARMs 3
Wild ARMs 4
Wild ARMs 5
Xenosaga Episode I
Xenosaga Episode II
Xenosaga Episode III
Those are the ones I haven't finished yet, though I'm very close to beating Persona 4, Final Fantasy X-2, and Wild ARMs 5. Pretty far into Dragon Quest VIII too.
Phantasy Star Universe I'll probably play on
instead and I've been working on the
version of Persona 3.